Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954188.1_cds_XP_016493106.1_83247
CDS Infomation

[gene=LOC107812495] [db_xref=GeneID:107812495] [protein=importin-5-like isoform X2] [protein_id=XP_016493106.1] [location=complement(join(2189..2404,2501..2566,4664..4882,5404..6609))] [gbkey=CDS]
Sequence

ATGGATATTAGCGAGTTGACTCAGTTCCAGAGGGCCCAGATGGAGGCGATTCTTGGGTCT
GACTCTAGTGTTCATTTTGAAACCTTTATCTCGGATCTCATGTCGAGCTCCTCTGAGGCT
GAGTTAATGTTGGACATGATCAAGCAGGAGAATTCTAACTTGCTTGCTGTTAAGCTTGCT
AACCTTCTTGACTCTCCCCATATCACTGATGATTCACGCGCTAAGTGTGCTATCGTCCTC
CAAAATTTGTTTTTTGGGGATGATGGATATGGTTGGCGCAATCTAAGTCTATCGACTCGG
TCCAGTGTGCAATGTATCCTTCTGAACCGTATCAAGATTGAAGAATCAAAATCCATTATC
CAGAACCTTTATATTACGCTTTGTGTAAGCCTCCAAGATAACAAGGAGTCTGAAGTACGT
AGCTTGTTCAACCAATATTATGACAGCTCCATTTATATCAAGGTAATAGAGCCCGCTTTG
TCATTAGTTTCCCAGTGCGCCAAACAAGGAGAGGACTTATCATCAGCCCCTTGGATCAAG
GATATATTACTAGGTGCACTGAATGGTTGCAGTGATATGAGATTGAGGATGGCTGCCCTG
AGGGCAGCGATCGACATCATTCAGTGCCTCCCGAGTTCAAACGATAAAGACTGGTATCAG
GGTTTATTGCCAGCTTTGTTGGGGACCTTGACAGAAGCATTGAACAAAGGTGAGGAGGTT
ACTGCCAGGGAAGCGCTGGAACATTTTGTTGAGTTTGCTGAGAATGAACCTAGGTTCTTA
AGGATGCAACTAGTAGAAGTGGTGGCTACCATGTTTGAGATAGCAGAGAATGAGAGTTTG
GAAAAGGAGACGAGGCACTTGACGATTAAGTTTCTGATAACTTTGGTTGAGGCGAAAAAG
GAAGCTCCCGGCATGATGAAGAAATTACCATTATTTACTAGCAACTGTTTTGCTATGTTA
TTGAAGTTGTTACAAGATGTTGAGGACGAACCACCTTGGAACAATATCCACAAGGTTGCA
TTTTGGGAATATGGTAACATTATGGTTGGGATCTGCTATTTCGATCGCCTATCTCGTGCA
TTAGGTGCTAAGACTATTGCTCCTGTTGCTAAAGAGCAGCTCTCTGCTTGCTTGGCTGCC
CCCGACTGGGAGAAACGCCATGCAGCACTTCTTGCACTTGCTGTTATTTCTGAATGTTGC
CCGAAGGTGATGCTTACGAGTATGGAGGAACTGGTTCTGAATTGTTTCCTGAACATGGTT
CTGAATTGTTTCCATGATCCTCACCCTCGAGTAAGATGGGCCGCTATTAGGGCAATTGCC
TTGTTTTCGACCTTCTTCTGTCCACAGCTGCAAGAACAATTCCATGATCAAGTATTACCT
ACATTAGCTGCAGCTATGGCAGATTTTCAAAATCCAATAATACAGAATGACAAACAAATG
GTCCAAGATGCAGCATCAATGGTGTTTACTGGTATAGCTAAATTGTCTAAGGAATACTGC
AGAATAAACTATGACACTGTTATGCAGTACTTAAAAACCGCCATGGCAAACAGAAACTTT
AATGTATTAGGTCGGGCCAGAGCAATATACTCCATAAGCTATCTTGGGTTCGCTGTTGGC
AAAGAGAAATTCAGAGATGACGCAAAACAGGTCTTCTACAAACTTTGTCCAGTAACCAAT
ACTTCTAGTCTAGTCACATATGAATGA

Peptide Sequence

PEP ID

XP_016493106.1
PEP Infomation

PREDICTED: importin-5-like isoform X2 [Nicotiana tabacum]
Sequence

MDISELTQFQRAQMEAILGSDSSVHFETFISDLMSSSSEAELMLDMIKQENSNLLAVKLA
NLLDSPHITDDSRAKCAIVLQNLFFGDDGYGWRNLSLSTRSSVQCILLNRIKIEESKSII
QNLYITLCVSLQDNKESEVRSLFNQYYDSSIYIKVIEPALSLVSQCAKQGEDLSSAPWIK
DILLGALNGCSDMRLRMAALRAAIDIIQCLPSSNDKDWYQGLLPALLGTLTEALNKGEEV
TAREALEHFVEFAENEPRFLRMQLVEVVATMFEIAENESLEKETRHLTIKFLITLVEAKK
EAPGMMKKLPLFTSNCFAMLLKLLQDVEDEPPWNNIHKVAFWEYGNIMVGICYFDRLSRA
LGAKTIAPVAKEQLSACLAAPDWEKRHAALLALAVISECCPKVMLTSMEELVLNCFLNMV
LNCFHDPHPRVRWAAIRAIALFSTFFCPQLQEQFHDQVLPTLAAAMADFQNPIIQNDKQM
VQDAASMVFTGIAKLSKEYCRINYDTVMQYLKTAMANRNFNVLGRARAIYSISYLGFAVG
KEKFRDDAKQVFYKLCPVTNTSSLVTYE

Transcript Sequence

Gene sequence data has not been registered.